Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.54□□□□□ -0.4
RoraP51448 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.54□□□□□ -0.4
RoraP51448 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
RoraP51448 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RoraP51448 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.54□□□□□ -0.4
RoraP51448 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RoraP51448 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.54□□□□□ -0.4
RoraP51448 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Gm42693-201ENSMUST00000196779 631 ntBASIC12.54□□□□□ -0.4
RoraP51448 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.54□□□□□ -0.4
RoraP51448 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.54□□□□□ -0.4
RoraP51448 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.54□□□□□ -0.4
RoraP51448 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RoraP51448 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RoraP51448 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.53□□□□□ -0.4
RoraP51448 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.53□□□□□ -0.4
RoraP51448 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.53□□□□□ -0.4
RoraP51448 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.53□□□□□ -0.4
RoraP51448 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.53□□□□□ -0.4
RoraP51448 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.53□□□□□ -0.4
RoraP51448 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RoraP51448 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
RoraP51448 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.52□□□□□ -0.4
RoraP51448 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RoraP51448 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RoraP51448 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RoraP51448 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RoraP51448 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RoraP51448 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RoraP51448 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms