Protein–RNA interactions for Protein: P49919

Cdkn1c, Cyclin-dependent kinase inhibitor 1C, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1cP49919 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1cP49919 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1cP49919 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1cP49919 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1cP49919 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdkn1cP49919 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1cP49919 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.58□□□□□ -0.08
Cdkn1cP49919 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.58□□□□□ -0.08
Cdkn1cP49919 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn1cP49919 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1cP49919 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm13036-201ENSMUST00000117799 748 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Mir7221-201ENSMUST00000184009 72 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 AA619741-201ENSMUST00000195095 646 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Gm5867-201ENSMUST00000063197 592 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Mir497b-201ENSMUST00000093601 125 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.57□□□□□ -0.08
Cdkn1cP49919 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdkn1cP49919 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1cP49919 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms