Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox18P43680 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Gm29608-201ENSMUST00000190444 463 ntBASIC12.78□□□□□ -0.36
Sox18P43680 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox18P43680 Gm38018-201ENSMUST00000195651 540 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Gm19540-201ENSMUST00000221843 810 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sox18P43680 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Sox18P43680 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.77□□□□□ -0.36
Sox18P43680 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Sox18P43680 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox18P43680 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Gm5133-201ENSMUST00000118940 1255 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Sox18P43680 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.77□□□□□ -0.37
Sox18P43680 Gm7809-201ENSMUST00000153199 742 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Gm8959-201ENSMUST00000213150 571 ntBASIC12.77□□□□□ -0.37
Sox18P43680 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Morn2-202ENSMUST00000227729 656 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Gm16372-201ENSMUST00000073088 450 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Sox18P43680 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Sox18P43680 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox18P43680 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.77□□□□□ -0.37
Sox18P43680 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox18P43680 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox18P43680 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Sox18P43680 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Sox18P43680 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Sox18P43680 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Sox18P43680 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox18P43680 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms