Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hist1h1aP43275 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.95□□□□□ -0.66
Hist1h1aP43275 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.95□□□□□ -0.66
Hist1h1aP43275 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hist1h1aP43275 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.94□□□□□ -0.66
Hist1h1aP43275 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gm27430-201ENSMUST00000184585 107 ntBASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gm44333-201ENSMUST00000197168 107 ntBASIC10.94□□□□□ -0.66
Hist1h1aP43275 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1aP43275 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms