Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.71□□□□□ -0.21
HttP42859 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.71□□□□□ -0.21
HttP42859 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HttP42859 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HttP42859 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.71□□□□□ -0.21
HttP42859 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.71□□□□□ -0.21
HttP42859 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HttP42859 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
HttP42859 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HttP42859 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HttP42859 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HttP42859 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HttP42859 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HttP42859 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HttP42859 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.7□□□□□ -0.22
HttP42859 Gm8199-201ENSMUST00000121323 823 ntBASIC13.7□□□□□ -0.22
HttP42859 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.7□□□□□ -0.22
HttP42859 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.7□□□□□ -0.22
HttP42859 Gm45500-201ENSMUST00000211676 803 ntBASIC13.7□□□□□ -0.22
HttP42859 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HttP42859 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.7□□□□□ -0.22
HttP42859 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.7□□□□□ -0.22
HttP42859 Gm25604-201ENSMUST00000158359 133 ntBASIC13.7□□□□□ -0.22
HttP42859 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.7□□□□□ -0.22
HttP42859 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.7□□□□□ -0.22
HttP42859 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.7□□□□□ -0.22
HttP42859 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HttP42859 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HttP42859 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.7□□□□□ -0.22
HttP42859 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.7□□□□□ -0.22
HttP42859 Gm14219-201ENSMUST00000120414 288 ntBASIC13.7□□□□□ -0.22
HttP42859 Gm12196-201ENSMUST00000120954 262 ntBASIC13.7□□□□□ -0.22
HttP42859 Gm23363-201ENSMUST00000175024 79 ntBASIC13.7□□□□□ -0.22
HttP42859 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.7□□□□□ -0.22
HttP42859 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.7□□□□□ -0.22
HttP42859 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
HttP42859 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HttP42859 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.69□□□□□ -0.22
HttP42859 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.69□□□□□ -0.22
HttP42859 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HttP42859 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.69□□□□□ -0.22
HttP42859 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.69□□□□□ -0.22
HttP42859 Gm18204-201ENSMUST00000209835 793 ntBASIC13.69□□□□□ -0.22
HttP42859 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HttP42859 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HttP42859 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.69□□□□□ -0.22
HttP42859 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.69□□□□□ -0.22
HttP42859 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HttP42859 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.69□□□□□ -0.22
HttP42859 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.69□□□□□ -0.22
HttP42859 Mir181d-201ENSMUST00000102383 72 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.68□□□□□ -0.22
HttP42859 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.68□□□□□ -0.22
HttP42859 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms