Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf9P41274 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.68□□□□□ -0.38
Tnfsf9P41274 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm1335-201ENSMUST00000121653 386 ntBASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm37497-201ENSMUST00000195830 798 ntBASIC12.68□□□□□ -0.38
Tnfsf9P41274 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm44069-201ENSMUST00000204898 506 ntBASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf9P41274 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf9P41274 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.67□□□□□ -0.38
Tnfsf9P41274 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.67□□□□□ -0.38
Tnfsf9P41274 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Gm10478-201ENSMUST00000084451 396 ntBASIC12.67□□□□□ -0.38
Tnfsf9P41274 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.67□□□□□ -0.38
Tnfsf9P41274 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf9P41274 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.66□□□□□ -0.38
Tnfsf9P41274 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.66□□□□□ -0.38
Tnfsf9P41274 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.66□□□□□ -0.38
Tnfsf9P41274 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Gm10146-201ENSMUST00000072739 309 ntBASIC12.66□□□□□ -0.38
Tnfsf9P41274 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf9P41274 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.66□□□□□ -0.38
Tnfsf9P41274 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms