Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm27552-201ENSMUST00000183351 62 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm27844-201ENSMUST00000183613 62 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Daam2-202ENSMUST00000224595 1926 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm5070-201ENSMUST00000177599 862 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm45770-201ENSMUST00000212105 616 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm18730-201ENSMUST00000218038 343 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.55□□□□□ -0.24
Cxcl12P40224 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cxcl12P40224 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl12P40224 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cxcl12P40224 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm23699-201ENSMUST00000158835 135 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cxcl12P40224 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm43058-201ENSMUST00000197645 625 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.54□□□□□ -0.24
Cxcl12P40224 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cxcl12P40224 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cxcl12P40224 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Cxcl12P40224 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl12P40224 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms