Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.34□□□□□ -0.27
Fen1P39749 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gm43125-201ENSMUST00000201724 730 ntBASIC13.34□□□□□ -0.27
Fen1P39749 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Fen1P39749 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Fen1P39749 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fen1P39749 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.33□□□□□ -0.27
Fen1P39749 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fen1P39749 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Fen1P39749 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Fen1P39749 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.33□□□□□ -0.28
Fen1P39749 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 Gm8927-201ENSMUST00000181978 981 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Mir6990-201ENSMUST00000183724 91 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Gm29541-201ENSMUST00000191351 678 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Gm16476-201ENSMUST00000221544 139 ntBASIC13.33□□□□□ -0.28
Fen1P39749 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.33□□□□□ -0.28
Fen1P39749 Gm3222-201ENSMUST00000071282 990 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.33□□□□□ -0.28
Fen1P39749 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fen1P39749 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fen1P39749 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Fen1P39749 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.32□□□□□ -0.28
Fen1P39749 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Fen1P39749 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.32□□□□□ -0.28
Fen1P39749 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fen1P39749 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Fen1P39749 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.32□□□□□ -0.28
Fen1P39749 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.32□□□□□ -0.28
Fen1P39749 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.32□□□□□ -0.28
Fen1P39749 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.32□□□□□ -0.28
Fen1P39749 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Fen1P39749 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fen1P39749 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms