Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Upk2P38575 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.63□□□□□ -0.55
Upk2P38575 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upk2P38575 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Upk2P38575 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Upk2P38575 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.62□□□□□ -0.55
Upk2P38575 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Gm5687-201ENSMUST00000118252 640 ntBASIC11.62□□□□□ -0.55
Upk2P38575 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.62□□□□□ -0.55
Upk2P38575 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.62□□□□□ -0.55
Upk2P38575 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Upk2P38575 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.62□□□□□ -0.55
Upk2P38575 Itm2b-204ENSMUST00000228637 783 ntBASIC11.62□□□□□ -0.55
Upk2P38575 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Upk2P38575 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk2P38575 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Upk2P38575 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Upk2P38575 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Upk2P38575 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Upk2P38575 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Upk2P38575 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.61□□□□□ -0.55
Upk2P38575 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.61□□□□□ -0.55
Upk2P38575 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.61□□□□□ -0.55
Upk2P38575 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.61□□□□□ -0.55
Upk2P38575 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.61□□□□□ -0.55
Upk2P38575 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk2P38575 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Upk2P38575 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Upk2P38575 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Upk2P38575 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms