Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Foxa1P35582 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.26□□□□□ -0.45
Foxa1P35582 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Foxa1P35582 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Foxa1P35582 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm15806-201ENSMUST00000120696 955 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm9002-201ENSMUST00000178437 499 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Gm6244-201ENSMUST00000178732 841 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Foxa1P35582 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.25□□□□□ -0.45
Foxa1P35582 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.25□□□□□ -0.45
Foxa1P35582 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Foxa1P35582 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Gm14350-201ENSMUST00000116642 640 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm11478-201ENSMUST00000117851 599 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm13612-201ENSMUST00000119276 390 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Mir7221-201ENSMUST00000184009 72 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm27892-201ENSMUST00000185017 106 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.24□□□□□ -0.45
Foxa1P35582 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Foxa1P35582 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Foxa1P35582 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Foxa1P35582 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Foxa1P35582 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.23□□□□□ -0.45
Foxa1P35582 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.23□□□□□ -0.45
Foxa1P35582 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Foxa1P35582 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms