Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.29□□□□□ -0.44
Thbs1P35441 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Thbs1P35441 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm19931-201ENSMUST00000198920 368 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm42550-201ENSMUST00000201553 960 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Thbs1P35441 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm14363-201ENSMUST00000122304 409 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm28631-201ENSMUST00000190740 334 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Gm38223-201ENSMUST00000194484 695 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.28□□□□□ -0.44
Thbs1P35441 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.28□□□□□ -0.44
Thbs1P35441 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Thbs1P35441 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs1P35441 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs1P35441 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.27□□□□□ -0.44
Thbs1P35441 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Thbs1P35441 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Thbs1P35441 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.27□□□□□ -0.44
Thbs1P35441 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Thbs1P35441 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Thbs1P35441 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Thbs1P35441 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.27□□□□□ -0.44
Thbs1P35441 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Thbs1P35441 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms