Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.21□□□□□ -0.45
Sftpa1P35242 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm23270-201ENSMUST00000104055 131 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm4909-201ENSMUST00000118749 794 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm12502-201ENSMUST00000120197 444 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm14277-201ENSMUST00000121195 360 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm26956-201ENSMUST00000182176 986 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm37986-201ENSMUST00000193285 383 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.21□□□□□ -0.45
Sftpa1P35242 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.21□□□□□ -0.45
Sftpa1P35242 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sftpa1P35242 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sftpa1P35242 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sftpa1P35242 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.21□□□□□ -0.46
Sftpa1P35242 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.21□□□□□ -0.46
Sftpa1P35242 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Sftpa1P35242 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Sftpa1P35242 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sftpa1P35242 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sftpa1P35242 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Gm14263-201ENSMUST00000117955 746 ntBASIC12.2□□□□□ -0.46
Sftpa1P35242 Gm12217-201ENSMUST00000118858 696 ntBASIC12.2□□□□□ -0.46
Sftpa1P35242 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.2□□□□□ -0.46
Sftpa1P35242 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.2□□□□□ -0.46
Sftpa1P35242 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.2□□□□□ -0.46
Sftpa1P35242 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sftpa1P35242 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sftpa1P35242 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms