Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Mir874-201ENSMUST00000104769 76 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 Auts2-212ENSMUST00000178555 309 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm9824-201ENSMUST00000178707 561 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.41□□□□□ -0.58
Slc6a1P31648 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Slc6a1P31648 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.41□□□□□ -0.58
Slc6a1P31648 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.4□□□□□ -0.58
Slc6a1P31648 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.4□□□□□ -0.58
Slc6a1P31648 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Slc6a1P31648 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Slc6a1P31648 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc6a1P31648 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Slc6a1P31648 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc6a1P31648 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc6a1P31648 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Slc6a1P31648 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc6a1P31648 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.4□□□□□ -0.59
Slc6a1P31648 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.4□□□□□ -0.59
Slc6a1P31648 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Slc6a1P31648 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms