Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm7653-201ENSMUST00000214567 508 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd40lgP27548 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.25□□□□□ -0.45
Cd40lgP27548 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd40lgP27548 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd40lgP27548 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.24□□□□□ -0.45
Cd40lgP27548 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.24□□□□□ -0.45
Cd40lgP27548 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.24□□□□□ -0.45
Cd40lgP27548 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.24□□□□□ -0.45
Cd40lgP27548 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.24□□□□□ -0.45
Cd40lgP27548 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms