Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Gm29667-201ENSMUST00000190817 490 ntBASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1aP25118 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm21854-201ENSMUST00000179901 471 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm28760-201ENSMUST00000185995 736 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm5279-201ENSMUST00000199575 745 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms