Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.12□□□□□ -0.47
Hmgn1P18608 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.12□□□□□ -0.47
Hmgn1P18608 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.12□□□□□ -0.47
Hmgn1P18608 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn1P18608 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn1P18608 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hmgn1P18608 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Gm8000-201ENSMUST00000188378 592 ntBASIC12.11□□□□□ -0.47
Hmgn1P18608 Gm7774-201ENSMUST00000200064 533 ntBASIC12.11□□□□□ -0.47
Hmgn1P18608 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hmgn1P18608 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.11□□□□□ -0.47
Hmgn1P18608 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.11□□□□□ -0.47
Hmgn1P18608 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn1P18608 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgn1P18608 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm12403-201ENSMUST00000121384 959 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmgn1P18608 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgn1P18608 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.1□□□□□ -0.47
Hmgn1P18608 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms