Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Kcna1P16388 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Kcna1P16388 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Kcna1P16388 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Kcna1P16388 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Kcna1P16388 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.02■□□□□ -0
Kcna1P16388 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Kcna1P16388 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Kcna1P16388 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.02■□□□□ -0
Kcna1P16388 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Gm23931-201ENSMUST00000103842 109 ntBASIC15.02■□□□□ -0
Kcna1P16388 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.02■□□□□ -0
Kcna1P16388 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.02■□□□□ -0
Kcna1P16388 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Kcna1P16388 Gm27682-201ENSMUST00000183930 110 ntBASIC15.02■□□□□ -0
Kcna1P16388 Gm45784-201ENSMUST00000188360 142 ntBASIC15.02■□□□□ -0
Kcna1P16388 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.02■□□□□ -0
Kcna1P16388 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.02■□□□□ -0
Kcna1P16388 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.02■□□□□ -0
Kcna1P16388 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.02■□□□□ -0
Kcna1P16388 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.02■□□□□ -0
Kcna1P16388 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.02□□□□□ -0.01
Kcna1P16388 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Kcna1P16388 Gm13615-201ENSMUST00000120242 1612 ntBASIC15.02□□□□□ -0.01
Kcna1P16388 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Kcna1P16388 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Kcna1P16388 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Kcna1P16388 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Kcna1P16388 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Kcna1P16388 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15□□□□□ -0.01
Kcna1P16388 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Kcna1P16388 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15□□□□□ -0.01
Kcna1P16388 Gm43818-201ENSMUST00000200605 466 ntBASIC15□□□□□ -0.01
Kcna1P16388 Gm44985-201ENSMUST00000206202 1016 ntBASIC15□□□□□ -0.01
Kcna1P16388 AC134254.1-201ENSMUST00000221362 167 ntBASIC15□□□□□ -0.01
Kcna1P16388 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Kcna1P16388 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Kcna1P16388 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms