Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fv4P11370 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fv4P11370 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Fv4P11370 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fv4P11370 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.81□□□□□ -0.36
Fv4P11370 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Fv4P11370 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.81□□□□□ -0.36
Fv4P11370 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Fv4P11370 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.81□□□□□ -0.36
Fv4P11370 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.81□□□□□ -0.36
Fv4P11370 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Fv4P11370 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fv4P11370 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.81□□□□□ -0.36
Fv4P11370 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Fv4P11370 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fv4P11370 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Fv4P11370 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.8□□□□□ -0.36
Fv4P11370 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.8□□□□□ -0.36
Fv4P11370 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.8□□□□□ -0.36
Fv4P11370 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Fv4P11370 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.8□□□□□ -0.36
Fv4P11370 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.8□□□□□ -0.36
Fv4P11370 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.8□□□□□ -0.36
Fv4P11370 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.8□□□□□ -0.36
Fv4P11370 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Fv4P11370 Gm5354-201ENSMUST00000182417 973 ntBASIC12.8□□□□□ -0.36
Fv4P11370 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.8□□□□□ -0.36
Fv4P11370 Gm42550-201ENSMUST00000201553 960 ntBASIC12.8□□□□□ -0.36
Fv4P11370 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.8□□□□□ -0.36
Fv4P11370 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Syt7-204ENSMUST00000223586 1344 ntBASIC12.8□□□□□ -0.36
Fv4P11370 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.8□□□□□ -0.36
Fv4P11370 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fv4P11370 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Fv4P11370 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms