Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PtcraP0C6B2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm7287-201ENSMUST00000205267 602 ntBASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.53□□□□□ -0.56
PtcraP0C6B2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.53□□□□□ -0.56
PtcraP0C6B2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.53□□□□□ -0.56
PtcraP0C6B2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PtcraP0C6B2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PtcraP0C6B2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm13612-201ENSMUST00000119276 390 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm14928-201ENSMUST00000120198 477 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm11918-201ENSMUST00000121660 179 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm23984-201ENSMUST00000157139 203 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm45384-201ENSMUST00000210451 277 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gm17794-201ENSMUST00000220252 955 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.52□□□□□ -0.57
PtcraP0C6B2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PtcraP0C6B2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.52□□□□□ -0.57
PtcraP0C6B2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.51□□□□□ -0.57
PtcraP0C6B2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.51□□□□□ -0.57
PtcraP0C6B2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms