Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp6P0C0A3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm28911-201ENSMUST00000188837 117 ntBASIC14.43□□□□□ -0.1
Chmp6P0C0A3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp6P0C0A3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm27701-201ENSMUST00000184498 110 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms