Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC19.64■□□□□ 0.73
NclP09405 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
NclP09405 Gm38049-201ENSMUST00000195698 1372 ntBASIC19.64■□□□□ 0.73
NclP09405 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NclP09405 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NclP09405 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC19.63■□□□□ 0.73
NclP09405 Gm25927-201ENSMUST00000175058 117 ntBASIC19.63■□□□□ 0.73
NclP09405 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC19.63■□□□□ 0.73
NclP09405 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NclP09405 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NclP09405 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.63■□□□□ 0.73
NclP09405 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NclP09405 Gm2420-202ENSMUST00000202224 2249 ntBASIC19.62■□□□□ 0.73
NclP09405 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC19.62■□□□□ 0.73
NclP09405 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC19.62■□□□□ 0.73
NclP09405 AC133598.1-201ENSMUST00000224327 660 ntBASIC19.62■□□□□ 0.73
NclP09405 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NclP09405 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC19.61■□□□□ 0.73
NclP09405 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC19.61■□□□□ 0.73
NclP09405 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Mir1247-201ENSMUST00000116706 82 ntBASIC19.61■□□□□ 0.73
NclP09405 Gm11637-201ENSMUST00000120601 592 ntBASIC19.61■□□□□ 0.73
NclP09405 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC19.61■□□□□ 0.73
NclP09405 Gm43179-201ENSMUST00000198797 275 ntBASIC19.61■□□□□ 0.73
NclP09405 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC19.61■□□□□ 0.73
NclP09405 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Gm9823-201ENSMUST00000051212 327 ntBASIC19.61■□□□□ 0.73
NclP09405 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Gm42769-201ENSMUST00000198576 1659 ntBASIC19.61■□□□□ 0.73
NclP09405 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NclP09405 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NclP09405 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NclP09405 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.6■□□□□ 0.73
NclP09405 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Pcgf5-211ENSMUST00000225920 6443 ntBASIC19.6■□□□□ 0.73
NclP09405 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NclP09405 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.6■□□□□ 0.73
NclP09405 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.6■□□□□ 0.73
NclP09405 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.6■□□□□ 0.73
NclP09405 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms