Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Hoxd3P09027 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm12403-201ENSMUST00000121384 959 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm27847-201ENSMUST00000183711 107 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm27375-201ENSMUST00000183799 107 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 CT025525.2-201ENSMUST00000227743 423 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Itm2b-204ENSMUST00000228637 783 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm26315-201ENSMUST00000083890 321 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.4□□□□□ -0.74
Hoxd3P09027 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxd3P09027 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxd3P09027 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxd3P09027 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.4□□□□□ -0.75
Hoxd3P09027 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxd3P09027 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxd3P09027 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Hoxd3P09027 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Hoxd3P09027 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxd3P09027 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms