Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TnfP06804 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TnfP06804 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TnfP06804 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TnfP06804 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.03□□□□□ -0.16
TnfP06804 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
TnfP06804 Gm38002-201ENSMUST00000193255 180 ntBASIC14.03□□□□□ -0.16
TnfP06804 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.03□□□□□ -0.16
TnfP06804 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.03□□□□□ -0.16
TnfP06804 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.03□□□□□ -0.16
TnfP06804 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TnfP06804 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.03□□□□□ -0.16
TnfP06804 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TnfP06804 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.02□□□□□ -0.16
TnfP06804 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.02□□□□□ -0.16
TnfP06804 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.02□□□□□ -0.16
TnfP06804 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TnfP06804 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TnfP06804 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TnfP06804 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.02□□□□□ -0.17
TnfP06804 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.02□□□□□ -0.17
TnfP06804 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.02□□□□□ -0.17
TnfP06804 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.02□□□□□ -0.17
TnfP06804 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Mir6420-201ENSMUST00000185032 102 ntBASIC14.02□□□□□ -0.17
TnfP06804 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.02□□□□□ -0.17
TnfP06804 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.02□□□□□ -0.17
TnfP06804 Gm4768-201ENSMUST00000206199 686 ntBASIC14.02□□□□□ -0.17
TnfP06804 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Gm6013-201ENSMUST00000212264 699 ntBASIC14.02□□□□□ -0.17
TnfP06804 Gm19163-201ENSMUST00000223313 780 ntBASIC14.02□□□□□ -0.17
TnfP06804 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.02□□□□□ -0.17
TnfP06804 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.02□□□□□ -0.17
TnfP06804 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TnfP06804 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
TnfP06804 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TnfP06804 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TnfP06804 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.01□□□□□ -0.17
TnfP06804 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Mir7221-201ENSMUST00000184009 72 ntBASIC14.01□□□□□ -0.17
TnfP06804 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TnfP06804 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.01□□□□□ -0.17
TnfP06804 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.01□□□□□ -0.17
TnfP06804 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms