Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.71□□□□□ -0.37
P04213 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.71□□□□□ -0.37
P04213 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.71□□□□□ -0.37
P04213 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
P04213 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
P04213 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.71□□□□□ -0.37
P04213 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04213 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.71□□□□□ -0.38
P04213 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
P04213 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
P04213 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04213 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.7□□□□□ -0.38
P04213 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
P04213 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.7□□□□□ -0.38
P04213 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04213 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.7□□□□□ -0.38
P04213 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P04213 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.7□□□□□ -0.38
P04213 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P04213 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.7□□□□□ -0.38
P04213 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04213 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04213 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P04213 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.69□□□□□ -0.38
P04213 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.69□□□□□ -0.38
P04213 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.69□□□□□ -0.38
P04213 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.69□□□□□ -0.38
P04213 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Auts2-212ENSMUST00000178555 309 ntBASIC12.69□□□□□ -0.38
P04213 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.69□□□□□ -0.38
P04213 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04213 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms