Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.67□□□□□ -0.86
TcraP01849 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.67□□□□□ -0.86
TcraP01849 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
TcraP01849 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
TcraP01849 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TcraP01849 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TcraP01849 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
TcraP01849 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
TcraP01849 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.66□□□□□ -0.86
TcraP01849 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.66□□□□□ -0.86
TcraP01849 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.66□□□□□ -0.86
TcraP01849 Gm44608-201ENSMUST00000206827 855 ntBASIC9.66□□□□□ -0.86
TcraP01849 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TcraP01849 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.66□□□□□ -0.86
TcraP01849 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
TcraP01849 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.66□□□□□ -0.86
TcraP01849 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.66□□□□□ -0.86
TcraP01849 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TcraP01849 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
TcraP01849 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TcraP01849 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TcraP01849 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.65□□□□□ -0.86
TcraP01849 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.65□□□□□ -0.86
TcraP01849 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
TcraP01849 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.65□□□□□ -0.86
TcraP01849 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TcraP01849 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TcraP01849 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
TcraP01849 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.65□□□□□ -0.86
TcraP01849 Gm44492-201ENSMUST00000197012 141 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms