Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12□□□□□ -0.49
DhfrP00375 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Gm18636-201ENSMUST00000218846 1066 ntBASIC12□□□□□ -0.49
DhfrP00375 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12□□□□□ -0.49
DhfrP00375 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
DhfrP00375 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
DhfrP00375 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
DhfrP00375 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Gm44344-201ENSMUST00000200287 129 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Gm16476-201ENSMUST00000221544 139 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.99□□□□□ -0.49
DhfrP00375 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
DhfrP00375 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 BC001981-202ENSMUST00000191393 1545 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.99□□□□□ -0.49
DhfrP00375 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.99□□□□□ -0.49
DhfrP00375 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.99□□□□□ -0.49
DhfrP00375 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
DhfrP00375 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
DhfrP00375 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
DhfrP00375 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
DhfrP00375 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
DhfrP00375 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.98□□□□□ -0.49
DhfrP00375 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
DhfrP00375 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DhfrP00375 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
DhfrP00375 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
DhfrP00375 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.98□□□□□ -0.49
DhfrP00375 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms