Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vti1aO89116 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm12203-201ENSMUST00000118235 598 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Gm12209-201ENSMUST00000120089 596 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Vti1aO89116 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.28□□□□□ -0.12
Vti1aO89116 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm29608-201ENSMUST00000190444 463 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm38144-201ENSMUST00000192790 465 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Vti1aO89116 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Gm17330-201ENSMUST00000221047 165 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Matn2-206ENSMUST00000228570 2798 ntBASIC14.28□□□□□ -0.12
Vti1aO89116 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vti1aO89116 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vti1aO89116 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vti1aO89116 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vti1aO89116 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.27□□□□□ -0.12
Vti1aO89116 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vti1aO89116 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.27□□□□□ -0.13
Vti1aO89116 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Vti1aO89116 Gm10156-201ENSMUST00000122364 462 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.27□□□□□ -0.13
Vti1aO89116 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.27□□□□□ -0.13
Vti1aO89116 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vti1aO89116 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.27□□□□□ -0.13
Vti1aO89116 Gm27514-201ENSMUST00000183692 110 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.27□□□□□ -0.13
Vti1aO89116 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vti1aO89116 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vti1aO89116 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vti1aO89116 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vti1aO89116 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vti1aO89116 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Vti1aO89116 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Vti1aO89116 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms