Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hcn1O88704 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.71□□□□□ -0.37
Hcn1O88704 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hcn1O88704 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.71□□□□□ -0.37
Hcn1O88704 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Hcn1O88704 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.71□□□□□ -0.37
Hcn1O88704 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hcn1O88704 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.71□□□□□ -0.37
Hcn1O88704 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.71□□□□□ -0.37
Hcn1O88704 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hcn1O88704 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.71□□□□□ -0.37
Hcn1O88704 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.71□□□□□ -0.37
Hcn1O88704 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hcn1O88704 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hcn1O88704 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hcn1O88704 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hcn1O88704 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hcn1O88704 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hcn1O88704 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm14928-201ENSMUST00000120198 477 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.7□□□□□ -0.38
Hcn1O88704 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Gm45668-201ENSMUST00000211271 493 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hcn1O88704 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.7□□□□□ -0.38
Hcn1O88704 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hcn1O88704 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms