Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Gm15376-201ENSMUST00000122258 783 ntBASIC13□□□□□ -0.33
ClppO88696 Mir1982-201ENSMUST00000157368 74 ntBASIC13□□□□□ -0.33
ClppO88696 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
ClppO88696 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13□□□□□ -0.33
ClppO88696 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ClppO88696 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 CT030704.2-201ENSMUST00000228887 494 ntBASIC13□□□□□ -0.33
ClppO88696 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Gm24447-201ENSMUST00000083977 338 ntBASIC13□□□□□ -0.33
ClppO88696 Mir497b-201ENSMUST00000093601 125 ntBASIC13□□□□□ -0.33
ClppO88696 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13□□□□□ -0.33
ClppO88696 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13□□□□□ -0.33
ClppO88696 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.99□□□□□ -0.33
ClppO88696 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Gm12390-201ENSMUST00000117897 397 ntBASIC12.99□□□□□ -0.33
ClppO88696 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.99□□□□□ -0.33
ClppO88696 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.99□□□□□ -0.33
ClppO88696 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Mir1938-201ENSMUST00000158746 100 ntBASIC12.99□□□□□ -0.33
ClppO88696 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.99□□□□□ -0.33
ClppO88696 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.99□□□□□ -0.33
ClppO88696 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClppO88696 Gm5161-201ENSMUST00000075243 853 ntBASIC12.99□□□□□ -0.33
ClppO88696 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.99□□□□□ -0.33
ClppO88696 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ClppO88696 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClppO88696 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.99□□□□□ -0.33
ClppO88696 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClppO88696 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClppO88696 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.98□□□□□ -0.33
ClppO88696 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.98□□□□□ -0.33
ClppO88696 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClppO88696 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClppO88696 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.98□□□□□ -0.33
ClppO88696 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.98□□□□□ -0.33
ClppO88696 Gm27839-201ENSMUST00000184242 106 ntBASIC12.98□□□□□ -0.33
ClppO88696 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.98□□□□□ -0.33
ClppO88696 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.98□□□□□ -0.33
ClppO88696 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms