Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.24□□□□□ -0.45
Cops4O88544 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cops4O88544 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cops4O88544 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cops4O88544 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Cops4O88544 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cops4O88544 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cops4O88544 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Gm8410-201ENSMUST00000117225 605 ntBASIC12.23□□□□□ -0.45
Cops4O88544 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.23□□□□□ -0.45
Cops4O88544 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cops4O88544 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.23□□□□□ -0.45
Cops4O88544 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.23□□□□□ -0.45
Cops4O88544 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cops4O88544 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.23□□□□□ -0.45
Cops4O88544 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cops4O88544 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cops4O88544 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cops4O88544 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.22□□□□□ -0.45
Cops4O88544 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.22□□□□□ -0.45
Cops4O88544 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Gm29541-201ENSMUST00000191351 678 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.22□□□□□ -0.45
Cops4O88544 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Dupd1-202ENSMUST00000224735 548 ntBASIC12.22□□□□□ -0.45
Cops4O88544 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cops4O88544 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cops4O88544 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cops4O88544 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.21□□□□□ -0.45
Cops4O88544 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.21□□□□□ -0.45
Cops4O88544 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms