Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.67■□□□□ 0.26
Vamp4O70480 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.67■□□□□ 0.26
Vamp4O70480 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vamp4O70480 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vamp4O70480 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.66■□□□□ 0.26
Vamp4O70480 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.66■□□□□ 0.26
Vamp4O70480 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm6458-201ENSMUST00000211573 635 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.66■□□□□ 0.26
Vamp4O70480 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vamp4O70480 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vamp4O70480 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vamp4O70480 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
Vamp4O70480 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vamp4O70480 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.66■□□□□ 0.26
Vamp4O70480 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vamp4O70480 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.65■□□□□ 0.26
Vamp4O70480 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.65■□□□□ 0.26
Vamp4O70480 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.65■□□□□ 0.26
Vamp4O70480 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vamp4O70480 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.65■□□□□ 0.26
Vamp4O70480 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.65■□□□□ 0.26
Vamp4O70480 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.65■□□□□ 0.26
Vamp4O70480 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.65■□□□□ 0.26
Vamp4O70480 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.65■□□□□ 0.26
Vamp4O70480 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
Vamp4O70480 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vamp4O70480 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Vamp4O70480 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vamp4O70480 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.64■□□□□ 0.25
Vamp4O70480 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vamp4O70480 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.64■□□□□ 0.25
Vamp4O70480 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Gm18062-201ENSMUST00000208020 547 ntBASIC16.64■□□□□ 0.25
Vamp4O70480 Gm18055-201ENSMUST00000208254 547 ntBASIC16.64■□□□□ 0.25
Vamp4O70480 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Gm10268-201ENSMUST00000085340 555 ntBASIC16.64■□□□□ 0.25
Vamp4O70480 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vamp4O70480 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vamp4O70480 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vamp4O70480 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vamp4O70480 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms