Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm12390-201ENSMUST00000117897 397 ntBASIC16.13■□□□□ 0.17
Mmp8O70138 Gm13369-201ENSMUST00000119442 987 ntBASIC16.13■□□□□ 0.17
Mmp8O70138 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.13■□□□□ 0.17
Mmp8O70138 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.13■□□□□ 0.17
Mmp8O70138 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.13■□□□□ 0.17
Mmp8O70138 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.13■□□□□ 0.17
Mmp8O70138 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp8O70138 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Mmp8O70138 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp8O70138 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp8O70138 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Mmp8O70138 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Mmp8O70138 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm8805-201ENSMUST00000117848 313 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Mmp8O70138 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm29127-201ENSMUST00000188304 517 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm29705-201ENSMUST00000212598 474 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Mmp8O70138 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.12■□□□□ 0.17
Mmp8O70138 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp8O70138 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp8O70138 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.11■□□□□ 0.17
Mmp8O70138 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Mir686-201ENSMUST00000102174 109 ntBASIC16.11■□□□□ 0.17
Mmp8O70138 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.11■□□□□ 0.17
Mmp8O70138 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp8O70138 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.11■□□□□ 0.17
Mmp8O70138 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.11■□□□□ 0.17
Mmp8O70138 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.11■□□□□ 0.17
Mmp8O70138 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp8O70138 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp8O70138 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Mmp8O70138 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp8O70138 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.1■□□□□ 0.17
Mmp8O70138 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp8O70138 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.1■□□□□ 0.17
Mmp8O70138 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms