Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm15770-201ENSMUST00000117498 584 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.49□□□□□ -0.73
Efnb3O35393 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm21470-201ENSMUST00000187680 696 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.49□□□□□ -0.73
Efnb3O35393 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Pck2-205ENSMUST00000226352 2784 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.49□□□□□ -0.73
Efnb3O35393 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Efnb3O35393 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.49□□□□□ -0.73
Efnb3O35393 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.49□□□□□ -0.73
Efnb3O35393 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.48□□□□□ -0.73
Efnb3O35393 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Efnb3O35393 Gm15693-201ENSMUST00000120470 637 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Gm13385-201ENSMUST00000121089 220 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Mir7221-201ENSMUST00000184009 72 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Gm27430-201ENSMUST00000184585 107 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Efnb3O35393 Gm18766-201ENSMUST00000189811 808 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Gm44333-201ENSMUST00000197168 107 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.48□□□□□ -0.73
Efnb3O35393 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
Efnb3O35393 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Efnb3O35393 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Efnb3O35393 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms