Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.47□□□□□ -0.41
Cx3cl1O35188 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.47□□□□□ -0.41
Cx3cl1O35188 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm27892-201ENSMUST00000185017 106 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm7287-201ENSMUST00000205267 602 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Gm5356-201ENSMUST00000093326 615 ntBASIC12.46□□□□□ -0.41
Cx3cl1O35188 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cx3cl1O35188 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cx3cl1O35188 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Mir1894-201ENSMUST00000122802 81 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gm6244-201ENSMUST00000178732 841 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gm17794-201ENSMUST00000220252 955 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Gm18473-201ENSMUST00000220543 868 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Itm2b-204ENSMUST00000228637 783 ntBASIC12.45□□□□□ -0.42
Cx3cl1O35188 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms