Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm10553J3QPF1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm4984-201ENSMUST00000115987 360 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Gm10553J3QPF1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Gm5687-201ENSMUST00000118252 640 ntBASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm10553J3QPF1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms