Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Gm8805-201ENSMUST00000117848 313 ntBASIC13.2□□□□□ -0.3
Gm3139J3QK78 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Gm10146-201ENSMUST00000072739 309 ntBASIC13.2□□□□□ -0.3
Gm3139J3QK78 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3139J3QK78 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.19□□□□□ -0.3
Gm3139J3QK78 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Snora78-201ENSMUST00000158630 128 ntBASIC13.19□□□□□ -0.3
Gm3139J3QK78 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.19□□□□□ -0.3
Gm3139J3QK78 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.19□□□□□ -0.3
Gm3139J3QK78 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3139J3QK78 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Gm1335-201ENSMUST00000121653 386 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Gm11978-201ENSMUST00000122315 466 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Gm6458-201ENSMUST00000211573 635 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.18□□□□□ -0.3
Gm3139J3QK78 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3139J3QK78 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms