Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.92■□□□□ 0.14
NpcdF8VQB8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Gm16202-201ENSMUST00000117532 544 ntBASIC15.92■□□□□ 0.14
NpcdF8VQB8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.92■□□□□ 0.14
NpcdF8VQB8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gm12363-201ENSMUST00000122250 668 ntBASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gm9550-201ENSMUST00000161130 862 ntBASIC15.91■□□□□ 0.14
NpcdF8VQB8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NpcdF8VQB8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.9■□□□□ 0.14
NpcdF8VQB8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Gm26185-201ENSMUST00000157692 266 ntBASIC15.9■□□□□ 0.14
NpcdF8VQB8 Mir1943-201ENSMUST00000158276 73 ntBASIC15.9■□□□□ 0.14
NpcdF8VQB8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.9■□□□□ 0.14
NpcdF8VQB8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.9■□□□□ 0.14
NpcdF8VQB8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NpcdF8VQB8 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.89■□□□□ 0.14
NpcdF8VQB8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.89■□□□□ 0.13
NpcdF8VQB8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.89■□□□□ 0.13
NpcdF8VQB8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms