Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11397F6V5V4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11397F6V5V4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11397F6V5V4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.36□□□□□ -0.43
Gm11397F6V5V4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm20445-201ENSMUST00000061905 565 ntBASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.36□□□□□ -0.43
Gm11397F6V5V4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11397F6V5V4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Mir874-201ENSMUST00000104769 76 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm9522-201ENSMUST00000182394 926 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm17330-201ENSMUST00000221047 165 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11397F6V5V4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11397F6V5V4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms