Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ube4aE9Q735 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube4aE9Q735 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Ube4aE9Q735 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ube4aE9Q735 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube4aE9Q735 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Gm25668-201ENSMUST00000157700 129 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Gm17376-201ENSMUST00000166016 84 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.83■□□□□ 0.12
Ube4aE9Q735 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.83■□□□□ 0.12
Ube4aE9Q735 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4aE9Q735 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.82■□□□□ 0.12
Ube4aE9Q735 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4aE9Q735 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm14726-201ENSMUST00000120623 896 ntBASIC15.81■□□□□ 0.12
Ube4aE9Q735 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.81■□□□□ 0.12
Ube4aE9Q735 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms