Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4lE9Q2N0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Gm27892-201ENSMUST00000185017 106 ntBASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4lE9Q2N0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4lE9Q2N0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Mir1894-201ENSMUST00000122802 81 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm44069-201ENSMUST00000204898 506 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms