Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 AC159205.5-202ENSMUST00000224849 386 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 AC125209.1-201ENSMUST00000225812 766 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Mir339-201ENSMUST00000083659 96 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Gm11450-201ENSMUST00000121144 333 ntBASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 AC159819.2-201ENSMUST00000216151 342 ntBASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hfm1D3Z4R1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Hfm1D3Z4R1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hfm1D3Z4R1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hfm1D3Z4R1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hfm1D3Z4R1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Gm15515-201ENSMUST00000117827 822 ntBASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 AY036118-201ENSMUST00000200021 923 ntBASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Gm4782-201ENSMUST00000168705 2046 ntBASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Gm37912-201ENSMUST00000191895 3076 ntBASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hfm1D3Z4R1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm14644-201ENSMUST00000116671 647 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm15131-201ENSMUST00000119124 595 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm19931-201ENSMUST00000198920 368 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm45219-201ENSMUST00000205602 465 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm10752-201ENSMUST00000218348 729 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Gm10179-201ENSMUST00000086233 688 ntBASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hfm1D3Z4R1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Gm13315-201ENSMUST00000120376 991 ntBASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms