Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gm15376-201ENSMUST00000122258 783 ntBASIC12.01□□□□□ -0.49
Gm3543D3Z235 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gm5161-201ENSMUST00000075243 853 ntBASIC12.01□□□□□ -0.49
Gm3543D3Z235 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3543D3Z235 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm3543D3Z235 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Gm8337-201ENSMUST00000187358 1938 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12□□□□□ -0.49
Gm3543D3Z235 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm3543D3Z235 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12□□□□□ -0.49
Gm3543D3Z235 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Gm15770-201ENSMUST00000117498 584 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Gm16342-201ENSMUST00000124025 1025 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12□□□□□ -0.49
Gm3543D3Z235 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Gm42550-201ENSMUST00000201553 960 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Gm6983-201ENSMUST00000214912 628 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Gm18934-201ENSMUST00000216671 1044 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 AC130829.1-201ENSMUST00000221548 494 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12□□□□□ -0.49
Gm3543D3Z235 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Gm24447-201ENSMUST00000083977 338 ntBASIC12□□□□□ -0.49
Gm3543D3Z235 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm3543D3Z235 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3543D3Z235 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms