Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Scn7aB1AYL1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Scn7aB1AYL1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm22334-201ENSMUST00000158070 133 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm5616-201ENSMUST00000165252 384 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm8741-201ENSMUST00000174736 384 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm7003-201ENSMUST00000195089 312 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm11331-201ENSMUST00000119764 288 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm28882-201ENSMUST00000185504 314 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Gm29787-201ENSMUST00000222129 849 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scn7aB1AYL1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm45433-201ENSMUST00000209386 247 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm8959-201ENSMUST00000213150 571 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn7aB1AYL1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.67■□□□□ 0.26
Scn7aB1AYL1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms