Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Gm3332-201ENSMUST00000189337 928 ntBASIC10.62□□□□□ -0.71
Chd6A3KFM7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.62□□□□□ -0.71
Chd6A3KFM7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Chd6A3KFM7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm12990-201ENSMUST00000120372 468 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Mir744-201ENSMUST00000103261 100 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm28693-202ENSMUST00000190758 331 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.61□□□□□ -0.71
Chd6A3KFM7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chd6A3KFM7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm9954-202ENSMUST00000198686 4725 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms