Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm24543-201ENSMUST00000103867 82 ntBASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm15653-201ENSMUST00000119247 907 ntBASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm12882-201ENSMUST00000121696 517 ntBASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm27622-201ENSMUST00000183779 60 ntBASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Mir6956-201ENSMUST00000183598 62 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm45453-201ENSMUST00000211758 853 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Trav6n-6A0A075B6B2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Trav6n-6A0A075B6B2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms