Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Ank2-226ENSMUST00000189368 339 ntBASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Trav8-1A0A075B641 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm7153-201ENSMUST00000117092 455 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm5479-201ENSMUST00000160578 435 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm16026-204ENSMUST00000162652 683 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm34391-201ENSMUST00000203706 907 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Gm10154-201ENSMUST00000084445 354 ntBASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms