Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Mir449b-201ENSMUST00000104833 80 ntBASIC10.19□□□□□ -0.78
PdfS4R2K0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Gm12882-201ENSMUST00000121696 517 ntBASIC10.19□□□□□ -0.78
PdfS4R2K0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
PdfS4R2K0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
PdfS4R2K0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Gm7774-201ENSMUST00000200064 533 ntBASIC10.19□□□□□ -0.78
PdfS4R2K0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
PdfS4R2K0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PdfS4R2K0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.18□□□□□ -0.78
PdfS4R2K0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.18□□□□□ -0.78
PdfS4R2K0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.18□□□□□ -0.78
PdfS4R2K0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms