Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm4875-201ENSMUST00000118257 786 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm13616-201ENSMUST00000120600 222 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm17795-201ENSMUST00000214505 757 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
H2afb3S4R1G7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm7775-201ENSMUST00000218871 853 ntBASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm9063-201ENSMUST00000223299 582 ntBASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb3S4R1G7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb3S4R1G7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms