Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcb1Q9Z0H3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcb1Q9Z0H3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms