Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.34□□□□□ -0.75
CcsQ9WU84 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm9824-201ENSMUST00000178707 561 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm27430-201ENSMUST00000184585 107 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm44333-201ENSMUST00000197168 107 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CcsQ9WU84 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
CcsQ9WU84 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.33□□□□□ -0.76
CcsQ9WU84 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Gm15483-201ENSMUST00000120338 456 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.32□□□□□ -0.76
CcsQ9WU84 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 Mir6956-201ENSMUST00000183598 62 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Gm27920-201ENSMUST00000183953 96 ntBASIC10.32□□□□□ -0.76
CcsQ9WU84 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CcsQ9WU84 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms